Gymnodimine-D

Gymnodimine

Last updated at: Oct. 25, 2023

Recommended name
Gymnodimine-D
Synonyms
n/a
Recommended acronym
GYM-D
Abbreviation

Progenitors

Name
Alexandrium ostenfeldii
Note
Harju et al., 2016

Vector Species

Name
Cerastoderma edule
Note
Rossignoli et al., 2023

References

Kirsi Harju, 2016
Harju, K., Koskela, H., Kremp, A., Suikkanen, S., de la Iglesia, P., Miles, C. O., & Vanninen, P. (2016). Identification of gymnodimine D and presence of gymnodimine variants in the dinoflagellate Alexandrium ostenfeldii from the Baltic Sea. Toxicon, 112, 68-76.
Araceli E. Rossignoli, 2023
Rossignoli, A. E., Mariño, C., Martín, H., & Blanco, J. (2023). First Report of Two Gymnodimines and Two Tetrodotoxin Analogues in Invertebrates from the North Atlantic Coast of Spain. Marine Drugs, 21(4), 232.
Structure
Formula
C32H45NO5
Exact mono-isotopic mass
523.32977
Molfile
n/a
Alternative molfiles
n/a
SMILES
C1CN=C2[C@]3(C1)C(C(=C(CC3)C1C=C(C(=O)O1)C)C)C[C@@H](O)C1CCC(C3C[C@H](C(/C(=C/CC2)/C)O3)C)O1
Alternative SMILES
CC6(=CC(C5(=C(C)C4(CC(O)C1(CCC(O1)C2(CC(C)C(O2)C(C)=CCCC3(=NCCCC34CC5))))))OC6=O)
InChi key
FMHGCQPOFVARAI-SZARKWMASA-N
Alternative InChi keys
n/a
InChi
InChI=1S/C32H45NO5/c1-18-7-5-8-29-32(12-6-14-33-29)13-11-22(27-16-20(3)31(35)38-27)21(4)23(32)17-24(34)25-9-10-26(36-25)28-15-19(2)30(18)37-28/h7,16,19,23-28,30,34H,5-6,8-15,17H2,1-4H3/b18-7+/t19-,23?,24-,25?,26?,27?,28?,30?,32+/m1/s1
Alternative InChis
Spectra available
Unknown
Chem files

References

Kirsi Harju, 2016
Harju, K., Koskela, H., Kremp, A., Suikkanen, S., de la Iglesia, P., Miles, C. O., & Vanninen, P. (2016). Identification of gymnodimine D and presence of gymnodimine variants in the dinoflagellate Alexandrium ostenfeldii from the Baltic Sea. Toxicon, 112, 68-76.
Certified
Unknown
Certified links
    n/a
Non certified reference material
Unknown

Chemical analysis

Research
Unknown
Standardized
Unknown
Validated
Unknown
Official
n/a

Structure recognition assays

Research
Unknown
Standardized
Unknown
Validated
Unknown
Official
n/a

Functional assays

Research
Unknown
Standardized
Unknown
Validated
Unknown
Official
n/a

Animal assays

Research
Unknown
Standardized
Unknown
Validated
Unknown
Official
n/a

References

Araceli E. Rossignoli, 2023
Rossignoli, A. E., Mariño, C., Martín, H., & Blanco, J. (2023). First Report of Two Gymnodimines and Two Tetrodotoxin Analogues in Invertebrates from the North Atlantic Coast of Spain. Marine Drugs, 21(4), 232.
Regulatory status
Unknown
Human toxic syndrome(s)
n/a
Organ system toxicity
n/a
Risk assessment
Unknown
Molecular targets known
Unknown
Molecular targets
n/a
Toxic to aquatic animals
Unknown
TEF available
Unknown
Notes
Aifeng Li
Contact
Christopher Miles
Contact